Publicaciones
Transcriptome characterization of the ascidian Pyura chilensis using 454-pyrosequencing data from two distant localities on the southeast Pacific.
Haye, P. & Gallardo-Escárate, C.
This study describes the results from transcriptomes sequenced by 454-pyrosequencing from two populations separated by 10° of latitude of the endemic tunicate Pyura chilensis. Most transcripts were assembled in 43,972 contigs with an average length of 842 nucleotides. De novo assembly revealed that less than 30% of the contigs were annotated to Gene Ontology terms. A total of 71,662 single nucleotide polymorphisms (SNPs) were detected in 14,712 contigs. In silico differential expression of contigs annotated for SNPs revealed several genes differentially expressed in individuals collected from both populations. The present genomic resource will provide the basis to perform functional genomics on the species via the localization of genomic markers that can aid in determining levels of local adaptation, overall genetic structure and the genetic assessment of restocking programs for this species.
Año: 2015
Palabras claves: RNA-Seq; SNP; Pyura chilensis; Tunicates; Transcriptome; Pyrosequencing.
Reproduction reduces HSP70 expression capacity in Argopecten purpuratus scallops subject to hypoxia and heat stress.
Brokordt, K., Pérez, H., Herrera, C., & Gallardo, A.
In scallops, gonad production is highly demanding energetically, and reproduction usually occurs during spring-summer, a period of strong environmental changes. The synthesis of heat-shock proteins (HSPs) is a major mechanism of stress tolerance in animals, including scallops, and HSP expression contributes considerably to cellular energy demand. Therefore, reproductive investment may limit the availability of energy (in terms of ATP) for the expression of HSP in organisms exposed to environmental stress. We evaluated the stress response capacity of adult Argopecten purpuratus scallops to high temperature and hypoxia. Stress response capacity was assessed through gene expression (for temperature stress) and protein induction of 70 kD HSP at 3 reproductive stages: immature, mature and spawned. We also evaluated the effect of reproductive status on the cellular ATP provisioning capacity through citrate synthase activity. Immature scallops exposed to thermal stress showed 1.3- and 1.5-fold increases in hsp70 mRNA and HSP70 protein levels, respectively, and those exposed to hypoxia doubled their level of HSP70 compared to non-stressed immature scallops. However, following gonad maturation and spawning, hsp70 mRNA increased by only 0.49- and 0.65-fold, respectively, after thermal stress and HSP70 protein levels of scallops exposed to thermal and hypoxia stressors did not differ from those of non-stressed animals. In parallel, citrate synthase showed its highest level in immature scallops, declined with gonad maturation, and was lowest in spawned scallops. These results suggest that reproductive investment reduces the stress response capacity of A. purpuratus and that mature and spawned scallops could be more vulnerable to environmental stressors than immature individuals.
Año: 2015
Palabras claves: Reproductive cost, HSP70, hsp70 mRNA, Stress response, Thermal stress, Hypoxia stress, Scallops, Argopecten purpuratus.
Species separation within the Lessonianigrescens complex (Phaeophyceae, Laminariales) is mirrored by ecophysiological traits.
Koch, K, Thiel, M., Tellier, F., Hagen, W., Graeve, M., Tala, F., Laeseke, P., and Bischof K.
Lessonia nigrescens used to be an abundant kelp species along the Chilean coast, but recent molecular studies revealed the existence of a L. nigrescens species complex, which includes the two cryptic species Lessonia berteroana and Lessonia spicata. Since these species have different distributions (16°S–30°S for L. berteroana and 29°S–42°S for L. spicata), they experience differences in environmental conditions, such as solar irradiance, seawater temperature and air exposure during low tide. This study tested to what extent the genetic distinctness of each of the two species [identified by a mitochondrial marker (atp8/trnS)] is reflected by ecophysiological traits (total lipids, fatty acid composition, phlorotannins, pigments and variable chlorophyll a fluorescence of PSII) in response to the respective environmental conditions, prevailing along the latitudinal gradient. We studied algal individuals from eight populations (27°S–32°S, including the species overlapping zone). Phlorotannins, pigments and Chl a fluorescence of PSII were most crucial for species-specific adaptations at the respective growth sites, whereas changes in total lipids and fatty acid compositions were negligible. Hence, species differentiation within the L. nigrescens complex is also manifested at the ecophysiological level. These findings may help to predict kelp responses towards future environmental changes.
Año: 2015
Palabras claves: Chile; fatty acid composition; Lessonia nigrescens complex; phlorotannins; photosynthetic pigments.
Analysis of Life-History Traits in a Sex-Changing Marine Shrimp (Decapoda: Caridea: Rhynchocinetidae).
Osawa, Y., Aoki, M., Thiel, M., & Bauer, R.
The hypothesis of protandrous (male to female) sex change was tested for the first time in a rhynchocinetid shrimp, Rhynchocinetes uritai, with an analysis of life-history traits. Samples were taken monthly for 2 years in Oura Bay, Japan, using a combination of bait and refuge traps. Breeding was seasonal but extended from spring through autumn, with female-phase individuals (FPs) producing broods successively, with their ovaries maturing for a new spawn during incubation of a previous brood. Females incubated numerous (∼500–4000) embryos that suffered insignificant mortality before hatching. Recruitment of juveniles after planktonic larval development began in summer and peaked during the autumn, with negligible recruitment during winter and spring. Cohort analysis confirmed the hypothesis of protandric sex change in this species, with juveniles maturing into the male phase (MP) during their first reproductive season at an age of 6–10 mon, depending on the time of recruitment. Sex change occurred during the following winter when transitional individuals matured into FPs during their second reproductive season at an age of ≥18 mon. Two cohorts were followed from recruitment until the end of the study, indicating a life span of 21–25 mon. Aside from its sexual system, this sex-changing species showed no obvious differences in reproductive and other life-history traits from those of gonochoric species from similar latitudes and habitats.
Año: 2015
Palabras claves:
Energetic compensation is historically contingent and not supported for small mammals in South American or Asian deserts.
Kelt, D., Aliperti, J., Meserve, P., Milstead, W., Previtali, M., & Gutiérrez, J.
Understanding the nature of faunal assembly and community structure remains central to ecology. Research in North American deserts and some tropical forests provides evidence of energetic compensation and zero-sum dynamics, suggesting that species in some natural assemblages may be replaced with limited impact on ecosystem function. Experimental removal of a dominant small mammal (degu, Octodon degus) from replicate plots in semiarid coastal thorn-scrub habitat in north-central Chile revealed no evidence for energetic or functional compensation; energy consumption remained significantly lower on degu exclusions relative to control plots after 17 years of exclusion. This occurred in spite of the fact that the geographic species pools for South American sites generally are similar in size to those of most North American sites (mean and median number of species, 16.3 and 21.5 vs. 21.0 and 20, respectively). A macroecological assessment of energetically equivalent species at 394 arid sites in North America, the Gobi Desert, and South America indicated that the number of potentially equivalent species was lower than (Gobi) or similar to (South America) that found in North America, but when segregated by trophic groups, these faunas differed markedly. North American sites included large numbers of granivorous species whereas South American sites were dominated by omnivores. The more general trophic strategy in the latter sites would be expected to facilitate compensatory responses within local faunas, suggesting either that our site is anomalous or that other factors are governing local dynamics. Further research is needed to understand the generality of compensatory dynamics within natural systems, as this mechanism has direct relevance to discussions on ecological resilience in the face of ongoing environmental change.
Año: 2015
Palabras claves: Community ecology; degu; deserts; energetic compensation; functional redundancy; historical contingency; north-central Chile; Octodon degus; species coexistence; species redundancy; trophic strategy; zero-sum dynamics.
Sampling of riverine litter with citizen scientists — findings and recommendations.
Rech, S., Macaya-Caquilpán, V., Pantoja, J., Rivadeneira, M., Campodónico, C., & Thiel, M.
The quantity and composition of litter at riversides and in the surface waters, as well as the occurrence of illegal dumping sites, were studied along four rivers in Chile. Data generated by volunteers were compared to the results from a professional survey, using an identical protocol. Litter was found in considerable quantities at the riversides and in the surface waters at all the sites investigated. A generalized linear mixed model analysis showed that the recorded litter densities did not differ between volunteers and professionals, even after controlling for river, site, or distance between sampling locations, demonstrating that the volunteers successfully applied the sampling protocol. Differences occurred with respect to litter composition, which is most likely due to difficulties in the classification of litter items and particles and to the underestimation of litter present in surface water samples. Even though this study was only conducted at a small number of rivers and sites, a comparatively consistent pattern of direct and intentional litter deposition at riversides was recorded, highlighting that river basins require more protection. The results also show that the citizen science approach can be a suitable means for more extensive litter surveys at riversides and in other natural environments.
Año: 2015
Palabras claves: Citizen science, Data validation, Litter abundance, Litter sources, Riverine litter, Floating microplastics.
Biological invasions in terrestrial Antarctica: what is the current status and can we respond?.
Hughes, K., Pertierra, L., Molina-Montenegro, M., & Convey, P.
Until recently the Antarctic continent and Peninsula have been little impacted by non-native species, compared to other regions of the Earth. However, reports of species introductions are increasing as awareness of biological invasions as a major conservation threat, within the context of increased human activities and climate change scenarios, has grown within the Antarctic community. Given the recent increase in documented reports, here we provide an up-to-date inventory of known terrestrial non-native species introductions, including those subsequently removed since the 1990s, within the Antarctic Treaty area. This builds on earlier syntheses of records published in the mid-2000s, which focused largely on the sub-Antarctic islands, given the dearth of literature available at that time from the continental and maritime Antarctic regions. Reports of non-native species established in the natural environment (i.e. non-synanthropic) are mainly located within the Antarctic Peninsula region and Scotia Arc, with Deception Island, South Shetland Islands, the most impacted area. Non-native plants have generally been removed from sites of introduction, but no established invertebrates have yet been subject to any eradication attempt, despite a recent increase in reports. Legislation within the Protocol on Environmental Protection to the Antarctic Treaty has not kept pace with environmental best practice, potentially presenting difficulties for the practical aspects of non-native species control and eradication. The success of any eradication attempt may be affected by management practices and the biology of the target species under polar conditions. Practical management action is only likely to succeed with greater co-operation and improved communication and engagement by nations and industries operating in the region.
Año: 2015
Palabras claves: Antarctic Treaty area, Environmental Protocol, Alien species, Biosecurity, Invasion, Eradication.
A recolonization record of the invasive Poa annua in Paradise Bay, Antarctic Peninsula: modeling of the potential spreading risk.
Molina-Montenegro, M., Pertierra, L., Razeto-Barry, P., Díaz, J., Finot, V., & Torres-Díaz, C.
Antarctica is one of the most extreme environments for vascular plants occurrence worldwide, and only two native vascular plants have colonized this continent: Deschampsia antarctica and Colobanthus quitensis. Nevertheless, in recent years, several alien plant species has been found in Antarctica with negative effects on the native flora. In this study, we show a recolonization record of the most widespread plant invader in Antarctica (Poa annua) and the risk of a potential spreading in a highly visited site on the Antarctic Peninsula. Overall, two new P. annua individuals were recorded, where four specimens were previously reported and removed in 2010, suggesting that either a propagule load is continuous, or that a seed bank prevailed in the site. On the other hand, the spreading modeling suggests that the probability to colonize and spreading of P. annua increases notoriously with the possibility of dispersion of propagules, with consequent risk of displacement for the native flora. Biological invasions are a major threat to the integrity of native biodiversity in all biomes, and they have the potential to change irreversibly Antarctica’s fragile ecosystems.
Año: 2015
Palabras claves: Antarctica, Biodiversity, Invasions, Poa annua.
Fungal endophytes associated with roots of nurse cushion species have positive effects on native and invasive beneficiary plants in an alpine ecosystem.
Molina-Montenegro, M., Oses, R., Torres-Díaz, C., Atala, C., Núñez, M., & Armas, C.
Facilitation has been proposed to be a fundamental mechanism for plant coexistence, being particularly important in highly stressful environments such as alpine environments. In this type of environment, species called “cushion plants” can ameliorate the stressful conditions, acting as nurses for other plants. Of the several mechanisms proposed in the positive-interactions framework, plant–microorganism interaction may be one of the most common, but least documented. Here we show that the presence of endophytes isolated from the roots of cushion plants Laretia acaulis can play a fundamental role in the establishment, performance and survival of both native and exotic plant seedlings that are known to be facilitated by the cushion species.
To test this, we measured survival and growth of two native and one invasive species at 3200 m in the Andes of Central Chile. Plants were grown inside artificial cushions filled with native soil, with or without sterilization, and with or without fungal endophytic inoculation to evaluate the role of fungal endophytes on survival and growth. In addition, we conducted a second experiment in a greenhouse with the invasive species to evaluate the effect of fungal endophytic infection/association on plant ecophysiological performance, dry biomass and seed output.
Overall, our results showed a strong positive effect of fungal endophytes on the survival and growth of both native and invasive species. Moreover, maximum quantum efficiency (Fv/Fm), biomass accumulation and seed production were enhanced in the invasive species when soils were inoculated with endophytes. Thus, facilitation by root endophytic fungi on native and invasive alpine plants could determine survival and establishment in this harsh environment.
Several studies have shown that direct facilitation by cushion plants in alpine environments improves the performance and fitness of both native and exotic plants. Our results suggest that there are indirect effects, mediated by microorganism associations that may also help to explain the successful establishment of native and invasive species in these environments. If indirect plant–plant facilitation through root fungal endophytes proves to be a widespread phenomenon in alpine ecosystems, it could be a key component in the structuring of plant communities in those stressful environments.
Año: 2015
Palabras claves: Cushion plants; Endophytic fungi; Facilitation; Invasive species; Positive interactions; Taraxacum officinale.
Human harvesting impacts on managed areas: ecological effects of socially-compatible shellfish reserves.
Aswani, S., Flores, C., & Broitman, B.
We examined how human harvesting impacts on managed areas affect the abundance and size distribution of the edible mangrove shellfish Anadara granosa and Polymesoda spp. in the Roviana Lagoon, Solomon Islands. We tested two hypotheses: (1) in areas permanently and temporally closed to human exploitation, abundance and size distribution of these shellfish species is significantly greater than in sites open to exploitation and (2) moderate human disturbance of shell beds, particularly of Polymesoda spp., increases their abundance. Firstly, we studied perceptions of environmental states and processes coupled to foraging and management interventions to assess sociocultural influences on harvesting practices and ascertain the types of management regime that people would consider in a context where poaching and interloping are common practices. Secondly, we compared shellfish abundance and shell size from areas that were permanently protected, temporally reserved for communal harvest, and permanently open for exploitation. Thirdly, drawing from women’s local knowledge, we measured the abundance of Polymesoda spp. in relation to mud compactness in quadrats across the three management regimes. Results showed that both species were significantly more abundant in permanent and temporally closed sites than in open sites. In the mud compactness study, however, while shell abundance was greater in moderately compacted quadrats, there was no statistical relationship between mud compactness and shell abundance within or across the three management regimes. Results suggest that even under the strong impacts of poaching, temporally closed areas have more clams than open areas and are as effective as areas that are permanently closed nominally. The results also suggest that human harvesting regimes can influence the effectiveness of local management decisions and thus are important when designing community-based conservation programs in the Solomon Islands and other Pacific Islands.
Año: 2015
Palabras claves: Ecological disturbance, Foraging, MPAs, Shellfish, Ecological impacts, Social acceptability, Solomon Islands.