UCN-CEAZA
Mining of EST-SSR from 454 pyrosequencing in the surf clam Mesodesma donacium (Lamark, 1818).
Aguilar-Espinoza, A., Guzmán-Riffo, B., Haye, P., & Gallardo-Escárate, C.
Novel simple sequence repeats (SSR) were identified from 454 transcriptome pyrosequencing ESTs in the surf clam Mesodesma donacium. From 7,734 ESTs annotated with SSR motives, 75 putative EST-SSRs were selected according their repetitive DNA sequence and functional annotation (Gene ontology), of these, 15 were characterized on 45 individuals of two wild populations located in two different biogeographic transition zones of the coast of Chile (30 and 42°S). Most loci were in Hardy–Weinberg equilibrium, and the polymorphic information content (PIC) ranged from 0.243 to 0.634. Pairwise Fst between sampled populations was estimated in 0.478. These EST-SSR markers promise to be useful for future management strategies of this overexploited species.
Año: 2012
Palabras claves: Pyrosequencing 454, Expressed sequence tag (EST), Microsatellite, Mesodesma donacium
Referencia APA: Aguilar-Espinoza, A., Guzmán-Riffo, B., Haye, P., & Gallardo-Escárate, C. (2012). Mining of EST-SSR from 454 pyrosequencing in the surf clam Mesodesma donacium (Lamark, 1818). Conservation Genet Resour, 4(4), 829-832.
The marine brooder Excirolana braziliensis (Crustacea: Isopoda) is also a complex of cryptic species on the coast of Chile.
Varela, A. & Haye, P.
Speciation is a direct consequence of isolated populations in taxa with low dispersal potential. The brooding crustacean Excirolana braziliensis, with a presumably wide geographic range of distribution (~16° N-41° S in the Pacific and ~19° N-35° S in the Atlantic), has been detected to correspond to cryptic species on the coast of Panama. Latitudinal variations in reproductive features in E. braziliensis have been attributed to phenotypic plasticity, however, the differences may be the result of divergent populations. Considering that the taxon has been reported to be a complex of cryptic species in other geographic areas and given the phenotypic differences detected along its distribution range, we hypothesized that E. braziliensis is a complex of species in the coast of Chile. We used partial cytochrome c oxidase subunit I (COI) sequences from 132 individuals with the diagnostic morphology of E. braziliensis collected along ~2200 km of coast to determine the genetic structure of E. braziliensis. Phylogenetic and phylogeographic analyses showed three distinct clades with 14 to 19 % of genetic divergence and high values of genetic differentiation. Intra and inter-clade divergence revealed the existence of a species complex of E. braziliensis on the coast of Chile, supporting growing evidence of the high abundance of cryptic species in marine invertebrate taxa.
Año: 2012
Palabras claves: cryptic species, genetic differentiation, genetic distance, marine peracarids, phylogenetics.
Referencia APA: Varela, A. & Haye, P. (2012). The marine brooder Excirolana braziliensis (Crustacea: Isopoda) is also a complex of cryptic species on the coast of Chile. Rev. Chil. Hist. Nat., 85(4), 495-502.
Effect of two temperatures on ammonia excretion rates of Seriolella violacea (Palm fish) juveniles under rearing conditions.
Nerici, C., Silva, A., & Merino, G.
Nitrogenous compounds can be toxic to aquatic animals, especially when they are reared for production purposes at high stocking densities. Seriolella violacea is a pelagic fish, native from the easterly South Pacific Ocean. This species has shown desirable behavioral and metabolic characteristics under captivity conditions, which leaded the Marine Fish Laboratory from the UCN to increase its efforts on the research and development to validate S. violacea as a new aquaculture option. Therefore, the objective of this study is to determine the excretion rates of palm fish juveniles weighing 300–500 g at two different temperatures: 14 °C and 18 °C. Total ammonia as nitrogen (TAN) excreted was 4.4 ± 0.9 and 7.1 ± 1.9 mg TAN/kg fish/h for 14 °C and 18 °C respectively. The experiments were carried out in a recirculating system operating as a farm-like situation. Tests were performed in 1000 L rearing tanks operating as open respirometers. The results of the present study indicate that TAN excretion rates on S. violacea juveniles, is temperature dependent. Data obtained in these experiments are valuable information for the engineering design of land based aquaculture systems for palm fish.
Año: 2012
Palabras claves: Seriolella violacea; Excretion rates; Ammonia; Recirculating aquaculture system; Water quality
Referencia APA: Nerici, C., Silva, A., & Merino, G. (2012). Effect of two temperatures on ammonia excretion rates of Seriolella violacea (Palm fish) juveniles under rearing conditions. Aquacultural Engineering, 46, 47-52.