CEAZA
Definition of sanitary boundaries to prevent ISAv spread between salmon farms in southern Chile based on numerical simulations of currents.
Olivares, G., Sepúlveda, H., & Yannicelli, B.
The infectious Salmon Anemia virus (ISAv) is a pathogen that mainly affects the Atlantic Salmon (Salmo salar). It was detected in Norway in 1984 and in June 2007 appeared in Chile, producing a drop of more than 30% in the country's production level. It is expected that with certain regularity, outbreaks will continue to appear in Chile without the need of reintroducing the virus from foreign countries. We present a numerical study of the influence of winds and tides in the dispersion of lagrangian particles to simulate the transport of ISAv in the Aysen region, in southern Chile. This study combines the use of numerical models of the ocean and atmosphere, lagrangian tracking and biological aspects of ISAv infections. As in previous results, a wider dispersion of ISAv was observed during spring tides. Temporal changes in wind significantly modified the transport of viral particles from an infected center. Under similar forcing conditions, the areas of risk associated to culture sites separated by a few kilometers could be very different. Our main results remark the importance of the use of a detailed knowledge of hydrographic and atmospheric circulation in the definition of boundaries for sanitary management areas. We suggest that a methodology similar to the one presented in this study should be considered to define sanitary strategies to minimize the occurrence of native outbreaks of ISAv.
Año: 2015
Palabras claves: sanitary boundaries; ISAv; Atlantic Salmon; spread; numerical model; Chile.
Referencia APA: Olivares, G., Sepúlveda, H., & Yannicelli, B. (2015). Definition of sanitary boundaries to prevent ISAv spread between salmon farms in southern Chile based on numerical simulations of currents. Estuarine, Coastal And Shelf Science, 158, 31-39.
GRACE storage-runoff hystereses reveal the dynamics of regional watersheds.
Sproles, E., Leibowitz, S., Reager, J., Wigington, P., Famiglietti, J., & Patil, S.
We characterize how regional watersheds function as simple, dynamic systems through a series of hysteresis loops using measurements from NASA's Gravity Recovery and Climate Experiment (GRACE) satellites. These loops illustrate the temporal relationship between runoff and terrestrial water storage in three regional-scale watersheds (> 150 000 km2) of the Columbia River Basin, USA and Canada. The shape and size of the hysteresis loops are controlled by the climate, topography, and geology of the watershed. The direction of the hystereses for the GRACE signals moves in opposite directions from the isolated groundwater hystereses. The subsurface water (soil moisture and groundwater) hystereses more closely resemble the storage-runoff relationship of a soil matrix. While the physical processes underlying these hystereses are inherently complex, the vertical integration of terrestrial water in the GRACE signal encapsulates the processes that govern the non-linear function of regional-scale watersheds. We use this process-based understanding to test how GRACE data can be applied prognostically to predict seasonal runoff (mean Nash-Sutcliffe Efficiency of 0.91) and monthly runoff during the low flow/high demand month of August (mean Nash-Sutcliffe Efficiency of 0.77) in all three watersheds. The global nature of GRACE data allows this same methodology to be applied in other regional-scale studies, and could be particularly useful in regions with minimal data and in trans-boundary watersheds.
Año: 2015
Palabras claves:
Referencia APA: Leibowitz, S., Reager, J., Wigington, P., Famiglietti, J., & Patil, S. (2015). GRACE storage-runoff hystereses reveal the dynamics of regional watersheds. Hydrol. Earth Syst. Sci., 19(7), 3253-3272.
Calibrating the pollen signal in modern rodent middens from northern Chile to improve the interpretation of the late Quaternary midden record.
de Porras, M., Maldonado, A., Zamora-Allendes, A., & Latorre, C.
The use of rodent middens from northern Chile as paleoecological archives has at times been questioned due to concerns about their biogenic origin and the degree to which their record represents vegetation composition rather than rodent habits. To address such concerns, we carried out a modern calibration study to assess the representation of vegetation by pollen records from rodent middens. We compared vegetation censuses with soil-surface and midden (matrix and feces) pollen samples from sites between 21° and 28°S. The results show that (1) the pollen signal from the midden matrix provides a more realistic reflection of local vegetation than soil-surface samples due to the pollen-deposition processes that occur in middens; and (2) in contrast to feces pollen assemblages, which feature some biases, rodent dietary habits do not seem to influence midden matrix pollen assemblages, probably because midden agents are dietary generalists. Our finding that modern pollen data from rodent middens reflect vegetation patterns confirms the reliability of midden pollen records as paleoecological archives in northern Chile.
Año: 2015
Palabras claves: Rodent middens; Vegetation–pollen calibration; Northern Chile.
Referencia APA: de Porras, M., Maldonado, A., Zamora-Allendes, A., & Latorre, C. (2015). Calibrating the pollen signal in modern rodent middens from northern Chile to improve the interpretation of the late Quaternary midden record. Quaternary Research, 84(3), 301-311.
The response of nitrifying microbial assemblages to ammonium enrichment from salmon farm activities in a northern Chilean Fjord.
Elizondo-Patrone, C., Hernández, K., Yannicelli, B., Olsen, L., & Molina, V.
The consequences of aquaculture include alterations in nitrogen cycling in aquatic environments that may lead to ecosystem degradation. Herein salmon aquaculture release of ammonium (NH4+) to the water column and its effects on natural archaea and bacteria ammonia-oxidizers (AOA and AOB) and nitrite-oxidizing bacteria (NOB) community structure were studied in the Comau fjord using molecular approaches, such as: cloning (AOA and AOB richness), qPCR for C. Nitrosopumilus maritimus (AOA) and Nitrospina sp. (NOB) abundance (DNA) and RT-qPCR only for Nitrospina sp activity (RNA). Sampling was carried out in brackish (0.7–25 salinity, <5 m depth) and marine (>30 salinity, 25 m depth) waters during contrasting salmon production periods: rest (winter 2012), growth and harvest (summer and winter 2013). During the rest period, the highest NH4+ concentration was observed at Vodudahue River, whereas during productive periods NH4+ accumulated in the brackish layer inside salmon cages and in the vicinty (up to 700 m distance from the cages). The nitrifier community from the fjord reference station (Stn-C) was characterized by C. N. maritimus (AOA) and Nitrosomonas sp. (AOB) sequences affiliated with cosmopolitan ecotypes (e.g., marine, freshwater, hydrothermal), maxima abundances of C. N. maritimus (AOA) and Nitrospina sp. and extreme ranges of Nitrospina sp. activity occurred in the brackish layer. During productive periods, abundances of C. N. maritimus were co-varied with NH4+ concentrations inside salmon cages (summer) and the adjacent areas (winter). Productive periods were characterized by lower abundances but more homogeneity between brackish and marine areas than for the Stn-C nitrifiers. The physiological state of Nitrospina sp. estimated from cDNA:DNA ratios indicated higher growth during winter 2013 associated with NH4+ enrichment derived from production and river input. Our results suggest that in Comau Fjord, NH4+ enrichment events occur during salmon production and also naturally by river inputs, supporting an abundant and active nitrifying community potentially processing only part of the extra NH4+ that occurs, predominantly outside the salmon cages. Our work highlights the abundance and activities of nitrifying communities and identifies these communities as being sensitive to increased loads of NH4+.
Año: 2015
Palabras claves: Salmon farming; ammonium (NH4+) enrichment; nitrifying communities; Nitrospina sp.; Patagonian fjords.
Referencia APA: Elizondo-Patrone, C., Hernández, K., Yannicelli, B., Olsen, L., & Molina, V. (2015). The response of nitrifying microbial assemblages to ammonium enrichment from salmon farm activities in a northern Chilean Fjord. Estuarine, Coastal And Shelf Science, 166, 131-142. http://dx.doi.org/10.1016/j.ecss.2015.03.021
Herbivore-Alga Interaction Strength Influences Spatial Heterogeneity in a Kelp-Dominated Intertidal Community.
Aguilera, M., Valdivia, N., & Broitman, B.
There is a general consensus that marine herbivores can affect algal species composition and abundance, but little empirical work exists on the role of herbivores as modifiers of the spatial structure of resource assemblages. Here, we test the consumption/bulldozing effects of the molluscan grazer Enoplochiton niger and its influence on the spatial structure of a low intertidal community dominated by the bull kelp Durvillaea antarctica and the kelp Lessonia spicata. Through field experiments conducted at a rocky intertidal shore in north-central Chile (~30°-32°S), the edge of the grazer and algae geographic distributions, we estimated the strength and variability of consumptive effects of the grazer on different functional group of algae. We also used data from abundance field surveys to evaluate spatial co-occurrence patterns of the study species. Exclusion-enclosure experiments showed that E. niger maintained primary space available by preventing algal colonization, even of large brown algae species. The grazing activity of E. niger also reduced spatial heterogeneity of the ephemeral algal species, increasing bare space availability and variability through time in similar ways to those observed for the collective effect with other grazers. Overall, our result suggests that E. niger can be considered an important modifier of the spatial structure of the large brown algae-dominated community. Effects of E. niger on resource variability seem to be directly related to its foraging patterns, large body size, and population densities, which are all relevant factors for management and conservation of the large brown algae community. Our study thus highlights the importance of considering functional roles and identity of generalist consumers on spatial structure of the entire landscape.
Año: 2015
Palabras claves: Algae, Niger, Seaweed, Herbivory, Grazing, Population density, Foraging, Fronds.
Referencia APA: Aguilera, M., Valdivia, N., & Broitman, B. (2015). Herbivore-Alga Interaction Strength Influences Spatial Heterogeneity in a Kelp-Dominated Intertidal Community. PLOS ONE, 10(9), e0137287.
Disentangling the effects of propagule supply and environmental filtering on the spatial structure of a rocky shore metacommunity.
Valdivia, N., Aguilera, M., Navarrete, S., & Broitman, B.
Environment-driven variation in the supply of individuals to local assemblages can determine patterns of community structure. Alternatively, local environmental conditions can determine the type of species that can be successfully established in a given community. Most communities are probably found somewhere between these 2 extremes, but few studies have attempted to disentangle their effects in a community-wide context. Using multivariate approaches in rocky shore communities, we showed that environmental variables (i.e. sea surface temperature and wind stress), the benthic abundance of 108 species of invertebrates and macroalgae, and recruitment rates of invertebrates all shared significant spatial and temporal patterns of variability across a 400 km shoreline marked by the presence of a prominent upwelling centre. Variance-partition analyses for the invertebrates with pelagic development showed that spatially structured environmental filtering alone explained only 7% of the variation in community structure. In contrast, the combination of environmental conditions and recruitment variation explained 45% of the variability in community structure and an additional 18% was jointly explained by recruitment and spatial relationships among sampling sites. Unexplained variation (41%) can be attributed to factors like local species interactions that are robust to environmental variability. Therefore, environment-driven variation in recruitment rates can have, in comparison to pure environmental filtering, stronger effects on the structure of this metacommunity. Our results can serve as a foundation for predictive models of the response of biodiversity to climate change and other human-induced disturbances, which are predicted to alter local environmental conditions and dispersal pathways.
Año: 2015
Palabras claves: Metacommunity, Recruitment, Environmental filtering, Dispersal, Biodiversity, Chile, Marine, Mesoscale.
Referencia APA: Valdivia, N., Aguilera, M., Navarrete, S., & Broitman, B. (2015). Disentangling the effects of propagule supply and environmental filtering on the spatial structure of a rocky shore metacommunity. Marine Ecology Progress Series, 538, 67-79.
Human harvesting impacts on managed areas: ecological effects of socially-compatible shellfish reserves.
Aswani, S., Flores, C., & Broitman, B.
We examined how human harvesting impacts on managed areas affect the abundance and size distribution of the edible mangrove shellfish Anadara granosa and Polymesoda spp. in the Roviana Lagoon, Solomon Islands. We tested two hypotheses: (1) in areas permanently and temporally closed to human exploitation, abundance and size distribution of these shellfish species is significantly greater than in sites open to exploitation and (2) moderate human disturbance of shell beds, particularly of Polymesoda spp., increases their abundance. Firstly, we studied perceptions of environmental states and processes coupled to foraging and management interventions to assess sociocultural influences on harvesting practices and ascertain the types of management regime that people would consider in a context where poaching and interloping are common practices. Secondly, we compared shellfish abundance and shell size from areas that were permanently protected, temporally reserved for communal harvest, and permanently open for exploitation. Thirdly, drawing from women’s local knowledge, we measured the abundance of Polymesoda spp. in relation to mud compactness in quadrats across the three management regimes. Results showed that both species were significantly more abundant in permanent and temporally closed sites than in open sites. In the mud compactness study, however, while shell abundance was greater in moderately compacted quadrats, there was no statistical relationship between mud compactness and shell abundance within or across the three management regimes. Results suggest that even under the strong impacts of poaching, temporally closed areas have more clams than open areas and are as effective as areas that are permanently closed nominally. The results also suggest that human harvesting regimes can influence the effectiveness of local management decisions and thus are important when designing community-based conservation programs in the Solomon Islands and other Pacific Islands.
Año: 2015
Palabras claves: Ecological disturbance, Foraging, MPAs, Shellfish, Ecological impacts, Social acceptability, Solomon Islands.
Referencia APA: Aswani, S., Flores, C., & Broitman, B. (2015). Human harvesting impacts on managed areas: ecological effects of socially-compatible shellfish reserves. Rev Fish Biol Fisheries, 25(1), 217-230.
Response of photosynthesis and respiration to temperature under water deficit in two evergreen Nothofagus species.
Sanhueza, C., Bascunan-Godoy, L., Turnbull, M., & Corcuera, L.
Respiration and photosynthesis were studied in two Nothofagus species with different drought tolerance in order to evaluate the effect of water deficit on foliar carbon balance and the possible role of the alternative pathway on respiratory adjustment. We propose that under severe water deficit the more drought-tolerant species N. dombeyi is able to decrease its respiration more than the less drought-tolerant species N. nitida, thus carbon gain could be maintained when photosynthesis is suppressed by drought. Dark respiration (Rd) and carbon assimilation under saturating light (Asat) were evaluated under seasonal field conditions and during drying and re-watering cycles under glasshouse. In addition, respiratory pathway changes were evaluated by oxygen isotope fractionation. In the field, N. dombeyi displayed greater light-saturated photosynthetic capacity than N. nitida, but Rd did not differ between species during summer. In the glasshouse, N. dombeyi displayed an unchanged rate of Rd and increased carbon loss under severe water deficit. Nothofagus nitida displayed a more flexible respiratory response to water deficit, with a lower thermal sensitivity of respiration (decrease in Q10) and a decrease in Rd. This contributed to maintaining leaf carbon balance during the water deficit period. Respiratory electron flow was mainly via the cytochrome pathway for both species and under all treatments, indicating no strong participation of alternative respiration. Our results suggest that under severe water stress, N. dombeyi could be more injured than N. nitida and that the lack of control in the carbon loss under prolonged periods of drought could be limiting for its survival.
Año: 2015
Palabras claves: Alternative oxidase; carbon balance; drought tolerance; isotopic discrimination; temperate forest.
Referencia APA: Sanhueza, C., Bascunan-Godoy, L., Turnbull, M., & Corcuera, L. (2015). Response of photosynthesis and respiration to temperature under water deficit in two evergreen Nothofagus species. Plant Species Biology, 30(3), 163-175.
A hydrogeochemistry and isotopic approach for the assessment of surface water–groundwater dynamics in an arid basin: the Limarí watershed, North-Central Chile.
Oyarzún, R., Jofré, E., Morales, P., Maturana, H., Oyarzún, J., & Kretschmer, N. et al.
This paper describes the results of a hydrochemistry and isotopic study of surface water and groundwater dynamics at the Limarí River basin, arid North-Central Chile. The study involved two sampling campaigns, performed in April (Fall, at the end of the irrigation season) and December 2010 (late Spring, at the peak of the irrigation season). The main results show the effect of La Paloma and Hurtado dams on the chemical and isotopic compositions of the Grande and Hurtado rivers (main tributaries of the Limarí River), the influence of return flows to the Limarí River from surface water irrigation in agricultural areas, the local effects of metallurgical operations in the El Ingenio Creek, the effect of water–rock interaction processes, and the nearby coastal belt influence on the Punitaqui Creek area and the lower part of the Limarí River. In addition, this study shows an active interaction between surface water and shallow groundwater, and a minor importance of local precipitation events, on the hydrological behavior in the study area. An exception is the Rinconada de Punitaqui zone where the results are consistent with the origin of the water being associated with local precipitation. Also, sources of sulfate, which is present in high levels especially in surface waters, have been assessed. The results of this study, based on an integrated use of chemical and isotopic tracers, provide sound and useful information to establish the level of interaction between surface water and groundwater, allowing the development of a hydrological conceptual model for the area.
Año: 2015
Palabras claves: Environmental isotopes, River−aquifer interaction, Flow conceptual model.
Referencia APA: Jofré, E., Morales, P., Maturana, H., Oyarzún, J., & Kretschmer, N. et al. (2015). A hydrogeochemistry and isotopic approach for the assessment of surface water–groundwater dynamics in an arid basin: the Limarí watershed, North-Central Chile. Environ Earth Sci, 73(1), 39-55.
A holistic picture of Austronesian migrations revealed by phylogeography of Pacific paper mulberry.
Chang, C., Liu, H., Moncada, X., Seelenfreund, A., Seelenfreund, D., & Chung, K.
The peopling of Remote Oceanic islands by Austronesian speakers is a fascinating and yet contentious part of human prehistory. Linguistic, archaeological, and genetic studies have shown the complex nature of the process in which different components that helped to shape Lapita culture in Near Oceania each have their own unique history. Important evidence points to Taiwan as an Austronesian ancestral homeland with a more distant origin in South China, whereas alternative models favor South China to North Vietnam or a Southeast Asian origin. We test these propositions by studying phylogeography of paper mulberry, a common East Asian tree species introduced and clonally propagated since prehistoric times across the Pacific for making barkcloth, a practical and symbolic component of Austronesian cultures. Using the hypervariable chloroplast ndhF-rpl32 sequences of 604 samples collected from East Asia, Southeast Asia, and Oceanic islands (including 19 historical herbarium specimens from Near and Remote Oceania), 48 haplotypes are detected and haplotype cp-17 is predominant in both Near and Remote Oceania. Because cp-17 has an unambiguous Taiwanese origin and cp-17–carrying Oceanic paper mulberries are clonally propagated, our data concur with expectations of Taiwan as the Austronesian homeland, providing circumstantial support for the “out of Taiwan” hypothesis. Our data also provide insights into the dispersal of paper mulberry from South China “into North Taiwan,” the “out of South China–Indochina” expansion to New Guinea, and the geographic origins of post-European introductions of paper mulberry into Oceania.
Año: 2015
Palabras claves: Broussonetia papyrifera, commensal approach, DNA of herbarium specimens, out of Taiwan hypothesis, Voyaging Corridor Triple I .
Referencia APA: Chang, C., Liu, H., Moncada, X., Seelenfreund, A., Seelenfreund, D., & Chung, K. (2015). A holistic picture of Austronesian migrations revealed by phylogeography of Pacific paper mulberry. Proceedings Of The National Academy Of Sciences, 112(44), 13537-13542.
Fungal endophytes associated with roots of nurse cushion species have positive effects on native and invasive beneficiary plants in an alpine ecosystem.
Molina-Montenegro, M., Oses, R., Torres-Díaz, C., Atala, C., Núñez, M., & Armas, C.
Facilitation has been proposed to be a fundamental mechanism for plant coexistence, being particularly important in highly stressful environments such as alpine environments. In this type of environment, species called “cushion plants” can ameliorate the stressful conditions, acting as nurses for other plants. Of the several mechanisms proposed in the positive-interactions framework, plant–microorganism interaction may be one of the most common, but least documented. Here we show that the presence of endophytes isolated from the roots of cushion plants Laretia acaulis can play a fundamental role in the establishment, performance and survival of both native and exotic plant seedlings that are known to be facilitated by the cushion species.
To test this, we measured survival and growth of two native and one invasive species at 3200 m in the Andes of Central Chile. Plants were grown inside artificial cushions filled with native soil, with or without sterilization, and with or without fungal endophytic inoculation to evaluate the role of fungal endophytes on survival and growth. In addition, we conducted a second experiment in a greenhouse with the invasive species to evaluate the effect of fungal endophytic infection/association on plant ecophysiological performance, dry biomass and seed output.
Overall, our results showed a strong positive effect of fungal endophytes on the survival and growth of both native and invasive species. Moreover, maximum quantum efficiency (Fv/Fm), biomass accumulation and seed production were enhanced in the invasive species when soils were inoculated with endophytes. Thus, facilitation by root endophytic fungi on native and invasive alpine plants could determine survival and establishment in this harsh environment.
Several studies have shown that direct facilitation by cushion plants in alpine environments improves the performance and fitness of both native and exotic plants. Our results suggest that there are indirect effects, mediated by microorganism associations that may also help to explain the successful establishment of native and invasive species in these environments. If indirect plant–plant facilitation through root fungal endophytes proves to be a widespread phenomenon in alpine ecosystems, it could be a key component in the structuring of plant communities in those stressful environments.
Año: 2015
Palabras claves: Cushion plants; Endophytic fungi; Facilitation; Invasive species; Positive interactions; Taraxacum officinale.
Referencia APA: Molina-Montenegro, M., Oses, R., Torres-Díaz, C., Atala, C., Núñez, M., & Armas, C. (2015). Fungal endophytes associated with roots of nurse cushion species have positive effects on native and invasive beneficiary plants in an alpine ecosystem. Perspectives In Plant Ecology, Evolution And Systematics, 17(3), 218-226.
Ecophysiological responses to drought followed by re-watering of two native Chilean swamp forest plants: Myrceugenia exsucca (DC.) O. Berg and Luma chequen (Molina) A. Gray
Bascuñán-Godoy, L., Alcaíno, C., Carvajal, D., Sanhueza, C., Montecinos, S., & Maldonado, A.
Myrceugenia exsucca (DC.) O. Berg and Luma chequen (Molina) A. Gray are two predominant species of Myrtaceae from the swamp forest which are strongly threatened by destruction of their habitat. Conservation programs include the creation of new protected areas which often have different environmental conditions respect their natural habitat. The drought tolerance and the capability to restore their physiological performance after stress relief are characteristic of great importance for the successful conservation programs on these kinds of plants. Understanding how these plants respond to episodic drought and watering pulse was the principal aim of this work. In this sense, water relations, soluble sugars, pigments and photosystem II (PSII) performance were studied. In general the water relationships were less affected by drought in L. chequen than in M. exsucca which was consistent with a higher maintenance of photochemical quenching (qP) in the first one. In addition, L. chequen exhibited complete recovery of water potential and maximum PSII efficiency and increasing the proportion of photochemical processes and soluble sugars related with a higher photosynthetic recovery. Contrastingly, M. exsucca was unable to recover its water potential and the proportion of open reaction centers of PSII under re-watering indicating a lower capacity of recovery. These results shown different capabilities to cope and reestablish physiological performance after water scarcity episode between these two native chilean swamp forest plants. We hope that these results will be important for conservation and re-vegetation managements programs.
Año: 2015
Palabras claves: Myrtaceae, photosynthetic performance, water deficit, re-watering.
Referencia APA: Bascuñán-Godoy, L., Alcaíno, C., Carvajal, D., Sanhueza, C., Montecinos, S., & Maldonado, A. (2015). Ecophysiological responses to drought followed by re-watering of two native Chilean swamp forest plants: Myrceugenia exsucca (DC.) O. Berg and Luma chequen (Molina) A. Gray. Gayana Bot., 72(2), 203-212.